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12-0928-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22560662 [Map]; Strand: w
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-0928-1 - 5-prime edge 
    CTTGGATTAT GTTTTTCATT TTCCTTTTGT ATTCCCTAAA ACGTTTTGCA 
    TCCTTTTCAG CCTACATTTT TACACAATCA ACAGTTTATG CAGTTTAGGT 
    GAAATCCATT TGTTGGTTTC TCTTTCATCT TGCAGTGTCC TTCTTCTATC 
    TGTTGTTTTC TTGTACAAGT TCCAATATGT TTGTGTTGTT CGAATAAGTG 
    ACTGATAATT TACAGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22560606 [Map]; Strand: w
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-0928-1 - 3-prime edge 
    ATGGANACTG NAAANGGNAG NGGTCTCTTN CCCGACCGTT NCNGACCGTT 
    NAAATCCCTN AATCCAAGTG AACAACACAA CACATTCCAG AAGTGTCATG 
    AATGCAAATC AATTNTACAN TCCANCNTGC ACCTACAAGA AGATAGATAA 
    AGCAATAGAA GAAGAAGCGT GGATTCTGAT TTTTGACATT GAGGAATCCC 
    ATTCCTGAGT ANTGGATCTT TAGACGACGT ACTNGCTCAC CACTAAAGAA 
    GAAGAAAATG AAACAGTGTT NGCAACATTG CATTGAAATT GAGAGGCACA 
    TTATCTTCTA TTGNGTGATC CATTTTGCAG NNGGATAATA TATCATGCTC 
    ACCTTGAAAG AAACAATAGC AAGAAATACA AATCACTCAC GCATAAGAGA 
    TGAAAAGAAA TGATNNCCGG TTTNATTGNA GGCAAGAATC GATTTTTGGT 
    ATCTTCGTCC TCCCATTCAA GCTNATTTTC CTGTTCTGGA GGATC

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR