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12-0702-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22552617 [Map]; Strand: c
      • AT1G61180.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    2. Chromosome: 1; Position: 22614806 [Map]; Strand: w
      • AT1G61310.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0702-1 - 5-prime edge
    CCCCAAGCTA TCAGTAGCNA GTACTGTGAG AATCGGAAGA ATTTTCGTTT 
    TGCATGTCAG AAAACTCTGC AGCGGATCTA GTCANAACAT NGATTGCATG
    CTCCCATTCT TGTACCATAG TTTTAGATGA CATTGTCTCA CCAATGACAT
    TGAGCGCCAA TGGCAGACCA CGACATTTTT GAGCCACCTC TCTTGCCAAC
    TCCACAATAA CAGGATCACT ACTTAATGTG TTGTCTCCGA CCTTGTTTTT
    GAACAACTCC CATGCATCCT CTGGTTTCAA ACAGTTGACT TGCATCGGCT
    TATGATCCCC CATCTGCCCA CAAACTTTCC GAGAACGGGT GGTGAATGCT
    ACTTTGCATT TATTTACTTC ACTCGGATAG GGAATACCAA TGGCCTCTAA
    ATCCACTTTC TCCCACATAT CATCTAGCAT CAAAACAAAT CTCTTTCCCT
    TTAAAACTCT GTGTATATCG GNGGCCTTAT CACTTTCATT CTTGTTCTTC
    CACAGGTCGT CACAAAGGTG TAGTTTCTCT GCAATATCTT NTTGAAGCTA
    CCANCCNGGG CCGNNNACCA CNCNNGC
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22609264 [Map]; Strand: w
      • AT1G61300.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0702-1 - 3-prime edge
    GCTTGGGGGA TGAACATATC AAGTCGTGTT TCCTATATTG TGCTCTGTTT 
    CCTGAAGATG GTCATATATA TAACGAAAAG TTGATAGACT ACTGGATATG
    CGAAGGATTC ATCGGAGAAG ACCAAGTTAT AAAAAGAGCG AGGAATAAGG
    GTTATGAGAT GCTCGGTACC CTTATCCGTG CAAATTTGCT AACAAAGGTT
    GGTACAGAAC ATGTTGTGAT GCATGACGTG GTTCGTGAAA TGGCTTTATG
    GATTGCATCC GATTTTGGGA AACAGAAAGA GAATTTTGTT GTGCGAGCAA
    GAGTCGGATT ACATGAAATA CCAGAAGTCA AGGATTGGGG AGCTGTAAGA
    AGGATGTCAT TAATGAGGAA TGAAATTGAA GAGATAACAT GCGAGTCCAA
    GTGTTCTGAA CTTACAACTT TGTTCCTTCA AAGTAATCAA TTGAAGAATC
    TATCAGGTGA ATT

AT1G61180.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 24701 Blast hits to 21254 proteins in 830 species: Archae - 23; Bacteria - 2777; Metazoa - 4902; Fungi - 437; Plants - 15881; Viruses - 0; Other Eukaryotes - 681 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61180.2

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61300.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 27714 Blast hits to 22073 proteins in 822 species: Archae - 18; Bacteria - 5358; Metazoa - 4578; Fungi - 354; Plants - 16806; Viruses - 2; Other Eukaryotes - 598 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61310.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR