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12-0696-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22629080 [Map]; Strand: c
      • AT1G61340.1 - [+] show detail - F-box family protein
        Distance: 0; Region: intron2 (CDS)
      • AT1G61340.2 - [+] show detail - F-box family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-0696-1 - 5-prime edge 
    AACAGAACCC AGAAATCACA AACAGATAAA AATAAGTTGT GATGAAATTC 
    TTGAATCTCA AAAACCAAAA AGGTTCAACT TTCAGCTCAA ATCTGATCAA 
    TACTCCGTAA ACTAATATGA ATCCTCAACT AATTAACAGA ACCCAGAAAT 
    CAGAAATGAT TAAGAATGAG TTTCTGATGA AATGAACCAG AAATTTAAAC 
    ACTTTCTCAT TTCCAAAACG AATTTTGAAT CTCAGATTAA AAACAAAAGG 
    ATTCAACTTT CAGCTCAATA TGATTGATAC TTTGTAAATT AAGAAGAAAT 
    GACAACTAAT TAACAAAACC AGAAAGAGAT TAAAAGAAAG AGTTAGTGAA 
    GAAACGAACC AGAATATCTA GGGGAAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22629144 [Map]; Strand: c
      • AT1G61340.1 - [+] show detail - F-box family protein
        Distance: 0; Region: intron2 (CDS)
      • AT1G61340.2 - [+] show detail - F-box family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-0696-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCACCGT 
    GAGTTCTGTT AATTAGCTGA GAGTCTTTGT TAATTCAGCG AGTGTCAATC 
    AGAGTGAGCT AAAAGTTGAA TCCTTTTTGT TCTCTGAGAT TCAAAATCGT 
    AATGGAAATG AGAAAATGTT CAACTTTTTC CATATCTGGA AAACTTTTGT 
    CATTGTGCGT AAGATCGTTT GACATTTCAT AGACACGTGT TGATAGATC

AT1G61340.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G05010.1); Has 91 Blast hits to 91 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61340.2

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G21510.1).
Link
InterPro Scan - TAIR