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12-0042-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22620241 [Map]; Strand: c
      • AT1G61320.1 - [+] show detail - FBD / Leucine Rich Repeat domains containing protein
        Distance: 388; Region: intergenic
      • AT1G61330.1 - [+] show detail - FBD, F-box and Leucine Rich Repeat domains containing protein
        Distance: -2734; Region: intergenic
    Flanking Genome Sequence: 12-0042-1 - 5-prime edge 
    ACTGTATGGC TCAGTATCCT CAGACACAGA GCTAATCCGG ACTGGCGAAA 
    GACCACTCCA TGGTCTTTTA TTTTCCTCCG TTTGTTTCTT CAACCTACGA 
    TCTACGTACC ACCTATATAT GTCGTGAACG CAATGGGAGA CGTCACCAAT 
    GTGACTATAC ACCGGCTGAC AATCTCATAT CCACCTTTAA CAGAGTGATC 
    TCCACCCGCA TATCTTCGTC GGACAACGTT CTTGAGGAGC TGCCATGGAG 
    ATGGAACTTA CTATCTAGGC CTTAATTTTA GGCTATATTT CATTTATTTA 
    AGCAGCTCTA TTTTTAAATG CCTCTTTGTC TAGTACTTGA TTTACTGTTA 
    AAAAAAAAAT TTGATTAATA AATTTCACAT TTCATATAAA ATAAATNGGA 
    AAAANAGTTC AAACCTGAAA TTAAACAAAG TCATAAACAA TAGAATTTCA 
    AACTAAAANA TTTTTTTTTT TTTTTTTTTT TGGGNCNAAA ATTTTTANNC 
    NAANAAAACN NTTTNAAANC CCNAAAAAAA AAANAAAANN NNGGGNANAC 
    TTTTNGNNTN NNANANACCA AAAAAAAAAA TTNTNNNGGG GGGNGGGGGG 
    GGGGGNCCNN CCNGGNTTAA ANCCNNGGGN NNTNNCCCCC CAAAAANGGG 
    NTTTTAAANC NNNNCCCCCC ACCCNGGGGG GGGGAANNNN NNTNNNNNNN 
    TNGGGGGGNN GNNNCCCCCC CCTTNAAAGG GGGNNNNNNN AAA

AT1G61320.1

Model type
Protein coding
Short Description
FBD / Leucine Rich Repeat domains containing protein
Computational Description
FBD / Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G61330.1); Has 419 Blast hits to 418 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61330.1

Model type
Protein coding
Short Description
FBD, F-box and Leucine Rich Repeat domains containing protein
Computational Description
FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT1G61320.1); Has 1015 Blast hits to 1010 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR