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11-6838-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1294786 [Map]; Strand: w
      • AT1G04645.1 - [+] show detail - Plant self-incompatibility protein S1 family
        Distance: -523; Region: promoter
    Flanking Genome Sequence: 11-6838-1 - 5-prime edge 
    AATCCGCTAC TATTTCAACT TTTTATCATG TTATAAGAGG AAAGTTTGTC 
    AAGTTCCTCT TGTGAAAAGT GTATTTGAGA GAAGCGCTTT GTTCTTTCTT 
    AAAGAACATC TTTAATCCCA AACATCTGTT AGCATAAAAG TCTTTTAACA 
    GTGTGTGATA GATAGCCACT GAAGATACTT TAGTCCGAAG CTGCGGTGAG 
    GCTTAACAAA TGAGAGACCA AATCTTCAAG ACACGAAAAC TGATTCGATA 
    AACTCTTTTG AAACTCTTCA CTCTCATTTT CATCTGACCT CAATTCGTTT 
    AAACCCTCGT TAATCCTCTT CACTCCATTC TGCAATAACT CCATTCCTCT 
    GCAAATTCCT TCTGGAAGTT TCCTTTTCTT GTTCGGTCGT TTCTCTACTT 
    CCATTGACCT CTGGCTTCTT CCTTCTAGAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1294670 [Map]; Strand: w
      • AT1G04645.1 - [+] show detail - Plant self-incompatibility protein S1 family
        Distance: -407; Region: promoter
    Flanking Genome Sequence: 11-6838-1 - 3-prime edge 
    AGCGGATTTA CCTCTTACCA CCGAAATTTT TGAACAAACG AGGTTAAGTT 
    GTCGACAACC GGCTATAAGA TTTTTGGGGC CAAAGGCTTA ATTATTTTCT 
    CAAGGTAACA TTAAAATATT TTAAAAACAT TATTGTAAAA ATATTAATAA 
    AATTGGGACT TCTTTGTAAT ATATTTTGCT TAATTTCATC AGAAAATGTG 
    GGGCCAAAGC CCATGTTTTT TTGGACGATC AATTTCGCAT AATCCATTAA 
    GATCTAATAT TATTATTTTA TTTTTTTTGT CTGGGTCAAA ACCACACTAA 
    ATTCTCATTT TACTGATTTG GATGTTTGTT TGGTCACATG ACTTTTACAC 
    TGATTTCTTT GTTTGTTTGG TCAATAGTCA ATGGGATAGT TACTATGTGA 
    ANAAACCGTC GAGCCCTTGG AATACTATAA AATCAACTCC AAGAGCAACC 
    TGAAAAGCCA CATTCATAAA TACAAACATC AAAATGGAAA AAGTTTCTAT 
    TGTTTGCTTC TTCTTCTTTC TTTTATTTGG TTCGGGTTAT GGGGGCCTCC 
    CACCGTTCTG GCGCGCTACG GTTGTCACGA TGACAAACTT GATTGGCGGT 
    CCACCTCTTA CCATACATNG CAAATCCAAG CNAGACNATC TAGGAATT

AT1G04645.1

Model type
Protein coding
Short Description
Plant self-incompatibility protein S1 family
Computational Description
Plant self-incompatibility protein S1 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT4G24974.1); Has 360 Blast hits to 349 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR