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11-6634-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 261317 [Map]; Strand: c
      • AT1G01700.1 - [+] show detail - RHO guanyl-nucleotide exchange factor 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6634-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATAACC TCTGGAGGAG GCTTTTCAGA CCAAATAGAT 
    GAAACCAGCA GTTTCTGCAC TGAGGCTTCT CCTAGTGATT GGCCTGTCTT 
    AACCGAATCC AACAACTCTG CGAGCTCAAA TTTTCCAACT GTCTTCGACT 
    TGAAACATAA TCAGATTGAG ACTGATGAGC ACCTTGCGGT CCAAGAAATT 
    TCAGAGCCAG GTTTTGTGTT TCTCCGTCTC TCTCTCTTTC TCTGTGTCTG 
    TATTTCCTCT TTGTCATTAT AATCATGAAA CTGTTATCGG TTTCGTAGCA 
    GAGCTGGAGA CGATGAAGGA AAGATTCTCG AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 261321 [Map]; Strand: c
      • AT1G01700.1 - [+] show detail - RHO guanyl-nucleotide exchange factor 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-6634-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    GGTTTCAGAA CATGTTCGAT GATAAGCAAA AGAATCTGTG CTCATTGTTG 
    AGTAAACCGG AGTTTCAGAT GCTGAATGAT CATTTGGATC GATGGGACCA 
    GGTGACTGAT GATAGCCCAC ATCGTCGTTT TCTTCGTGAT TTGGCAAATT 
    CTCCATCTTC TCAATGTTCT GTTTTTGAAA ATTCCTCTGC TTTTGTTGAT 
    CTCTTGTTTT AATAAAAGAA ATAAAGCT

AT1G01700.1

Model type
Protein coding
Short Description
RHO guanyl-nucleotide exchange factor 2
Curator Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
Computational Description
RHO guanyl-nucleotide exchange factor 2 (ROPGEF2); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 3 (TAIR:AT4G00460.2); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR