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11-6390-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2392744 [Map]; Strand: c
      • AT3G07500.1 - [+] show detail - Far-red impaired responsive (FAR1) family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-6390-1 - 5-prime edge 
    TAAATTACCC ACCCCTTTCT CTAACCAACT CTTAGCAGTT CTAATCTACT 
    ACATTCAGTC CTACGCTAGA TATAGTGGAC ACTTCTTCCA AAGTTTATCA 
    AATACACAAT GGCTCGAAGA TAAGCAGGTC CTCAAGAAGT GACTAATGGA 
    AACATAAACC CTAAACTATG TATTCATAAA CCCTAATGAA TAGGCAGAGA 
    GTAGCAATTT CAAGTGATAT TACTCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2392823 [Map]; Strand: c
      • AT3G07500.1 - [+] show detail - Far-red impaired responsive (FAR1) family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-6390-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACTA ATTTATAAGG 
    ATTTTCTAGG GTTTGGTTAG GTATTCGGTA GAGAGTTTCT GGTTTGGTGA 
    ACAAGACATA GCTTTGCATC ATTTGTTTTG AGTTGAGATG TTTGTGTGTT 
    GTGTTGTGGC AGTGGAAGGG AACTCTTTAC CCGAAGAAGA TGTAGAGATG 
    ATGGAGAATT

AT3G07500.1

Model type
Protein coding
Short Description
Far-red impaired responsive (FAR1) family protein
Computational Description
Far-red impaired responsive (FAR1) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor, FAR1-related (InterPro:IPR004330); BEST Arabidopsis thaliana protein match is: Far-red impaired responsive (FAR1) family protein (TAIR:AT2G43280.1); Has 895 Blast hits to 827 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 895; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR