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11-6317-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24802751 [Map]; Strand: c
      • AT5G61720.1 - [+] show detail - Protein of unknown function (DUF1216)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-6317-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTAT 
    ACAANCNNCN TTGAATTCAC CGCCTGATTC TGGAGCCAGC TTTGNNGAGT 
    CTGACCANAG TGAGGGTCTC TCATTCTAAT TAATGGAAAT ACTAAAACAC 
    AACGTTGTGT GTGAAAGTGT GTATCATATG TGNGTGTGTG TGTGGGGACA 
    TGCNTGNGTG GTNCTACCNT TAGGANNANC NGGCNAAGAT GATGGGAACT 
    ATNNGCGNTA GACACATCTG AAANATCTGG CGAGGACACA TGAACNNNGA 
    CACCACTNNN ACTGGTGCNN ANTCNANCTN CACNTGANCA ACAAATGCNN 
    AGACCNNANG TGATTAAGCT NTCTCTCTCT CTTAGCTACT CCAGAGAGAG 
    ACATATCANC NGCCCGGGCC GGCTCCNNGC GTGCGCCNAT TTTGGGGGTA 
    TTCTTCACGT AATGAGGTAA TGAGAACGTT CCTTGTGTTT CATACATANC 
    TCTTTTTGAA AAAGGGGATT CTACATTGNT GNCATAGNCA ATCCCAAAAG 
    ATGCCNNATC AATANACTGN CCTTTATCTT NANAGGCCGN CTTNACNAAT 
    ANACCGANGG CTCTANCCCA TTNACCNTNN ANCTGNNNNN ANNNNNNNCN 
    NGGCCGNNNN CNNNC

AT5G61720.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1216)
Computational Description
Protein of unknown function (DUF1216); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1216 (InterPro:IPR009605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1216) (TAIR:AT3G28830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR