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11-6152-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1294385 [Map]; Strand: w
      • AT1G04645.1 - [+] show detail - Plant self-incompatibility protein S1 family
        Distance: -122; Region: promoter
    Flanking Genome Sequence: 11-6152-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TACTGACCAA ACAAACATCC AAATCAGTAA 
    AATGAGAATT TAGTGTGGTT TTGACCCAGA CAAAAAAAAT AAAATAATAA 
    TATTAGATCT TAATGGATTA TGCGAAATTG ATCGTCCAAA AAAACATGGG 
    CNTTTGGCCC CACATTTTCT GATGAAATTA AGCAAAATAT ATTACAAAGA 
    AGTCCCAATT TTATTAATAT TTTTACAATA ATGTTTTTAA AATATTTTAA 
    TGTTACCTTG AGAAAATAAT TAAGCCTTTG GCCCCAAAAA TCTTATAGCC 
    GGTTGTCGAC AACTTAACCT CGTTTGTTCA AAAATTTCGG NGGTAAGAGG 
    TAAATCCGCT ACTATTTCAA CTTTTTATCA TGTTATAAGA GGAAAGTTTG 
    TCAAGTTCCT CTTGTGAAAA GTGTATTTGA NANAAGCGCT TTGTTCTTTC 
    TTAAANAACA TCTTTAATCC CAAACATCTG TTAGCATAAA AGTCTTTTAA 
    CAGTGTGTGA TANATAGCCA CTGAANATAC TTTAGTCCGA AGCTGCGGTG 
    AGGCTTAACA AATGAGAGAC CAAATCTTCA AGACACGAAA ACTGATTCNA 
    TAAACTCTNT NGAAACTCTT CACTCTCATT TTCATCTGAC CTCAATTCGT 
    TTAAACCCTC GTTAATCCTN TTCACTCCAT TCTGCAATAA CTCCATTCCT 
    NTGCAAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1294386 [Map]; Strand: w
      • AT1G04645.1 - [+] show detail - Plant self-incompatibility protein S1 family
        Distance: -123; Region: promoter
    Flanking Genome Sequence: 11-6152-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    CACATGACTT TTACACTGAT TTCTTTGTTT GTTTGGTCAA TAGTCAATGG 
    GATAGTTACT ATGTGAAGAA ACCGTCGAGC CCTTGGAATA CTATAAAATC 
    AACTCCAAGA GCAACCTGAA AAGCCACATT CATAAATACA AACATCAAAA 
    TGGAAAAAGT TTCTATTGTT TGCTTCTTCT TCTTTCTTTT ATTTGGTTCG 
    GGTTATGGGG GCCTCCCACC GTTCTGGCGC GCTACGGTTG TCACGATGAC 
    AAACTTGATT GGCGGTCCAC CTCTTACCAT ACATTGCAAA TCCAAGCAAG 
    ACGATCTAGG AATT

AT1G04645.1

Model type
Protein coding
Short Description
Plant self-incompatibility protein S1 family
Computational Description
Plant self-incompatibility protein S1 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT4G24974.1); Has 360 Blast hits to 349 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR