Home
Mutant Lines
11-5505-1

11-5505-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 9435380 [Map]; Strand: c
- AT1G27170.2 - [+] show detail - transmembrane receptors;ATP binding
  Distance: 0; Region: exon2 (CDS)
- AT1G27170.1 - [+] show detail - transmembrane receptors;ATP binding
  Distance: 0; Region: exon2 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTACTTGGTC TGGAATCACC TTTAAAGGAT TTGACGGGCC TGATCGACAC 
TGAATCCAGT TCTGGCGTCC AAGTCTTGGG ACTTTATGGT ATGGGTGGTA 
TTGGGAAGAC TACCCTTGCA AAAGCCTTTT ATAACAAGAT TGTCGGAAAC 
TTCGAGCAAC GAGCTTTCAT CTCAGACATT AGAGAAAGAT CATCAGCCGA 
AAATGGGTTA GTCACTCTTC AAAAAACTCT CATCAAGGAA CTTTTCCGTT 
TGGTACCTGA AATAGAGGAT GTTAGCATAG GCCTGGAAAA GATAAAAGCA 
AATGTTCACG AGAAGAAGAT TATTGTGGTT TTAGATGATG TTGATCACAT 
AGACCAGGTT CATGCCCTGG TTGGTGAAAC AAGATGGTAT GGTCAAGGAA 
CACTTATAGT AATCACTACT AGAGATTCTG AGATTCTGAG TAAGCTCTCA 
GTGAACCAAC AGTATGAGGT CAAGTGCTTG ACTGAGCCGC AGGCATTGAA 
GCTCTTTAGT TATCATTCAC TACGAAAAGA AGAACCAACA AAGAATCTGT 
TGGCGTTATC CAAGAAGATT GTCCAGATAT CAGGACTATT GCCGCTTGCA 
GTTGAAGTTT TTGGATCTCT TTTGTATGAC ANAAGGAGGA AAAGGATTGG 
CAAACTCAAC TGGATAAGCT GAAAAANACT CAACCAGGCA ATCTTCAGGA 
TGTTCTGGAC

AT1G27170.1

Model type: Protein coding
Short Description: transmembrane receptors;ATP binding
Computational Description: transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27170.2

Model type: Protein coding
Short Description: transmembrane receptors;ATP binding
Computational Description: transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink).
Link: InterPro Scan - TAIR