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Mutant Lines
11-5376-1

11-5376-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 517960 [Map]; Strand: c
- AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
  Distance: 8535; Region: intergenic
- AT2G02080.1 - [+] show detail - indeterminate(ID)-domain 4
  Distance: 199; Region: intergenic

GGTTGAATGG TTAAAAAATA GTAGAAACTT GGGATTACAC ATCTCAGTTT 
AGGAAGAATA CACACAAATC TGACCATAGG CAATCTATGC TGTGTTTTTA 
AAAACAACCC TCTCAACGGG ATGTTTCAAC ATGATGTGAG GTTAAATCCA 
TGTTTTGGTT CACTTAAAGC ATATTTTAAC ATGTCTAGTT GTTCCAATAA 
CTACCTGGAA TATTTTATCG TTTGTAACTA TCCAAATACT AAAAAATCCA 
AAGGAATGTC TCTGTCTATT GTTCTGAACC GTCATGCTTC GGTTGACACC 
ATAATATGAA GTCCATGTTC TCATATACCG ATGTTGATGG GATAGAAACA 
CTCCCAAAAT CGAAGGTACA GCAGATCATT GTGATTAATC GTCTCCGATC 
CCGCTCTGGT CCGTAACGGG ACAGAAGATA TCATAGTTAC ATCCCACAAT 
CTCTTAATCT AAAATTTACT ACCATATAAT CTAAAATGGT GTTCCAACAA 
AAGTGTTTTA AGTTTCGAAA GCTAGCTCTC TAATTTTTCA TGTTTGAATA 
TTCAGATAAA TCAAATTCGG CTTTCCACCG AGACTAAATG AATCTGATAT 
GATTAGAGGA CATGTTAACA AATATATTCT GATCATAAAC CACTAATAAT 
TGATCATAAA CCATCAAGAT TAATCTTTTT TAAAACCCTG ACTTACTTT

3 prime edge [+] show sequence

Chromosome: 2; Position: 518076 [Map]; Strand: c
- AT2G02070.1 - [+] show detail - indeterminate(ID)-domain 5
  Distance: 8651; Region: intergenic
- AT2G02080.1 - [+] show detail - indeterminate(ID)-domain 4
  Distance: 83; Region: intergenic

ATTCAACCCC ATTTCTTCGT TCTTTATCCA CTTCGTTTAG TTCCACCCTC 
TTCATTCGAA ACCATAATAT TTATCATTCT CTCGGTTATA AACAACACCA 
CATAAAATCA TATTGGAGTT GTAAGTCAGT ACAATAGCTA GCAAACTTAC 
AATCTTTTTT ATTATATAAA AGACAGACTC TAACCAAATC CAAACCTAAA 
AAGCTCTCAC TAAAGATATA CTATTATTAT ATAGTGATTA TGAAAACAAC 
AAGCGAAGAT AACAAAATTA TCACCTAATT AAGTTATACA ATAATAAGAT 
ATTATCAACC TCTTCCAAAT GGATAATTTT GCTCAGGAAA CTTCGCCTCA 
CCATCCAAAG AAACTCCGCC ACGAGCACTG CCGCGACCAC CACCACCACC 
ACCGCGATTT ACATTTCTCA CCATTCCTCC AACTCCAAGA AAATCTAACG 
TTAACTTGTC CGAGCCGCTC ATATTTCCAT TGTCTCCAAA TTGAACGTCG 
AAGATACTGC CACCGGATC

AT2G02070.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 5
Computational Description: indeterminate(ID)-domain 5 (IDD5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 61158 Blast hits to 25844 proteins in 587 species: Archae - 8; Bacteria - 480; Metazoa - 52168; Fungi - 1154; Plants - 982; Viruses - 10; Other Eukaryotes - 6356 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02080.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 4
Computational Description: indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 51298 Blast hits to 20221 proteins in 333 species: Archae - 2; Bacteria - 165; Metazoa - 48118; Fungi - 358; Plants - 855; Viruses - 7; Other Eukaryotes - 1793 (source: NCBI BLink).
Link: InterPro Scan - TAIR