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11-5275-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12193081 [Map]; Strand: c
      • AT1G33612.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 232; Region: intergenic
      • AT1G33615.1 - [+] show detail - other RNA
        Distance: 244; Region: intergenic
    Flanking Genome Sequence: 11-5275-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ATTTTTCACC CATGTTCAGA TTCGTCGTGT 
    GCCAAATATA TGTATAATGA TTAAATATAG TATTATTTAG TTGTTAAATA 
    TATTGTATTA TTTAAATAAA TTAATTCAAA TATGAGTTAA TTAGTAGGGT 
    AGTAGAACGA TCCTGACTTT TTATTTTAAT CCATATGTTA CCTGTAATTC 
    TAATTTTCAC ATATGAAAAT AATACGTTAA AAAAGTTATG TATTTACTGT 
    TTTGACTAAA TAATAGTGTA TTTAAGTTGA GAGATGACAC ATGTAACAAG 
    GACAGATGCC ACACGTAACT CTTGAATAAG AGAATCCCTT ATAATAATAA 
    GGTTAGTACA AATATTTTTT GGACCCAACT GTCGACACAT TAGATACAGA 
    TACTAATTAT AGTTTTCTTG CCACTACACT TTACAAGGAG AAAGTGGAGA 
    GCCACAAAGA CAGTCGTTAC CCGCAAACGC ACTGGCCGGG AACTTTGTCA 
    CCGGAAGTTT TCCGCAAAGA TGGTTTTGAC TCACGTTCAT TGTCTTCAGT 
    CCAGCAAATG TTGCCAGCAC TTTCCCGAAT ATCAAGTTCC TTGACAAATC 
    CAAGGTTTCA AGAGTCCTCA CAAACGTCAG CTTCCCCAAA TCGAATCGGA 
    GTTTGTTCCC TGCCGCTCGG AACTCCATCA NATACTTCAT CTGGCTGAGG 
    AACTTANCCG GACTCCCTGA GATCTNGTTT TCNACANATC GA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12193073 [Map]; Strand: c
      • AT1G33612.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 224; Region: intergenic
      • AT1G33615.1 - [+] show detail - other RNA
        Distance: 252; Region: intergenic
    Flanking Genome Sequence: 11-5275-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTGGTGAAAA ATGCTCTATT CATCTACACT GGAAACAGAG AGAAAATTAA 
    GAAGCTACAG AAAATGGTAC AGACAAAGAT TGTCTTAAGA AGATGACTAT 
    GGTACCGAGG TTTTGACAAG AAAATGTACC TCTCTGTGCA AGTTCACTAG 
    CCATTGTTTT TTTCCTATGA GATCTTGGGG CAAACCCAGT CAAGTAATTT 
    CCTTTCAAAT TCATGTGACA CAAATAAATG TCAGAGACAA ATACATTATC 
    AAATGTCTGT CAAAAGAAAT CCCTTTCTTA GGTTGTTGTT TTATGAATCC 
    CTGGAAAACA ATGCACATGA CTCTTATATA TAATGTGAAG AAAGAGGTTG 
    GTAGTGTGTG TGTATGGCTT GAATTTGTAT ACTTACAATG ACTCAAAAAG 
    GGAGAGATTT CTAAATGAGA CAGCTATTGG TCCTTGTAAT CCACTTGAAC 
    TAAGCTCATC AGTAGAATT

AT1G33612.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Computational Description
Leucine-rich repeat (LRR) family protein; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G33590.1).
Link
InterPro Scan - TAIR

AT1G33615.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR