1. Home
  2. Mutant Lines
  3. 11-4409-1

11-4409-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 306964 [Map]; Strand: c
      • AT5G01800.1 - [+] show detail - saposin B domain-containing protein
        Distance: -4; Region: promoter
    Flanking Genome Sequence: 11-4409-1 - 3-prime edge 
    TGTTTGACAA AAAAAGGGCC AATCATATAA TTCTGTTACC ATGGATCTAA 
    AATGAGAGGA GACTCTTGCT TTTTCACAAA AAAAAAANAA ANANATANAN 
    CANCACCCGC ANCANCATCN AAAATNATCN ATCGGTTTCT CTCTTTCNTT 
    AATCAAATCT AATNGATNCC CANCCTTNTT NATCGGAGGC CGGGTAANCT 
    ANCTTCTCCT TNTTNATCTT TTNTTACNCT NATTNGANGG TNGTTNATGT 
    NTCNATTCTA TGGATTAAAA NCTTTTACCN CATNTTAATT NGNCCCCAGN 
    CTCGTCGTNT NTNCAAACCT NTTNANCNCT TANGGTTNGA TTNAAATCTG 
    TTNAATTNAC CGTTNCANCC TAAAATNGTN GACANCTCAA AATCGGAATC 
    CCCCAAAAAG NGTCNGTNGA CTTATNAATN TGGCCNTCTC CAAATCGGTT 
    TTNGANCCAT CATCATTAAA TTGGGTAATA TNTAAATCNC NCNAGGAANC 
    ATGGNCGGTA AATTNGGAGN CCTCCTAGNC CTNTTCCTNT NGANCTGGNC 
    TTGNCATGCT ACAAACCCNA TTCTTNTCNA ACCATTCGGT AAAAACATTT 
    TNGAAGGCNT NTAAAGTCTC TCTTGCNCCT GTTTCTAATT CAAATTNGTT 
    AAAANCTGTN CNCTGGATTN TTNNAATCCN TNNCGTTTNC AAAAGCNTNC 
    ANTCNGANNT AAACANCCNG NNNNTGTTTT T

AT5G01800.1

Model type
Protein coding
Short Description
saposin B domain-containing protein
Computational Description
saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT3G51730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR