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11-4273-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24802079 [Map]; Strand: w
      • AT5G61720.1 - [+] show detail - Protein of unknown function (DUF1216)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-4273-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTAGG AGGATTCGTG GAAGCTGGTG GATGGATTGT 
    TGTCAATGGG TAAAGGTTTG GTTGAGATGA AGAAGAGCGG TTCGAAGGAG 
    ATAACTTTTG AAGAGAGAAG AGATCTGATC AGTTCTATGG TGAAATGGGC 
    TAGAGCCATC GGTCTATTCG TGAAGGCGGC CTCTGAACAT AAAGGACAGT 
    CTATTGATCT GGCATCTTTT GGNATTGACT ATGACAACAA TGTAGAATCC 
    CCTTTTTNAA ANNGAGCTAT NTATNAAACA CATGGAACAN TNCTCATTAC 
    CTCATTACGT GAAGAATACC CCCAANATGG GCAAAGCCAT TGANCCTTTC 
    NCTTACAAAG GTNTGTNCGA CTTNTTGGGT AGCCTAAANA GCAAGNGTCC 
    TNCCACACCA GAGTTCAGAG ATTTCTTTGT AAAGNNGGAG GACTATATGG 
    CCTGCTTCAN GTTGGTATCA CCCGAATCNN AATTCCAGAT GGCAGTGAAA 
    TCGNATAACC CTCTTCACGG CTATGATTTC ATTGGATGGT ACTAAAGGCG 
    GATCANTAAG TTCTAACTAG ACATTTATAA CATTTACTTA TATAGTGTGT 
    GAGACNTACG TNCCTCNCGG GNTTTAAATG AATTTNTAAA GATNGGTTCC 
    NTTTTTTTTG NCCANGTGGA TNCNTGGANG ATNCNTCATG GNNNNTNNTC 
    AATGGGAAAA ANTTNNGTTN NTNTNNACAA AANCCGGNTT

AT5G61720.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1216)
Computational Description
Protein of unknown function (DUF1216); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1216 (InterPro:IPR009605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1216) (TAIR:AT3G28830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR