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Mutant Lines
11-4238-1

11-4238-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 6884651 [Map]; Strand: w
- AT3G19820.3 - [+] show detail - cell elongation protein / DWARF1 / DIMINUTO (DIM)
  Distance: -2530; Region: intergenic
- AT3G19830.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: 955; Region: intergenic

GCCAGTTTTT ATTTTAAATT GTTGTGCCTT CTGTTTGATT GCATGTACTT 
AACTTCTTAT AATAAGTGTA GATCTACTCT TAACGTGCAA TTAACTAATA 
GTCTAATACA TCGGGGACAC NGTTCAATTG TTGGTAGCAT TCTTGTTTAG 
CATTATATAT AATCCATGAT TTTAGCAATA CCAATCAATC ATTCCAAAGA 
CAGATCGTTT CGTTTTCAGT GGCTTTTCAT TAGACGATAC ATTGTTACCC 
TACTCAAAAA CTTAACTCAA ATGGGTTACT TCAACAATCA ATATTGAAAA 
GAAATCACTT CTCAACAATA GATTAAGAAA ACGACCAGAA AGGAGACTTT 
CTTGCGCCTT TGTCTTGGTT CCCTGAAATT AACCATAGTT CAGTCTTAGT 
AACATCGAAC AAAATTGCTA AACTGATCCT AATGGGGAAA ACGATGCATG 
CATACAAAAC TGTTACACAA TACTGTAAAT TGCTAAACGC ATACACCAAA 
AAAGAAGCAA TCATAGCCTA TAAACAGCGT TCTTTGCCTT CGTTACAGGT 
TGTGAAACAC TATTTCTAAC CAAATATTGC AATGAATTTT CAAGCAAAAT 
ATTGTGAGTT AGATAGGCGA TGGGCTAATA AGTAGGAGTT GATTGGGAAG 
AAACGATATT AGATATTTGA AAGTTATGAA NAGTTTAACC TCTCCCTAAC 
ATGATCTAN

AT3G19820.3

Model type: Protein coding
Short Description: cell elongation protein / DWARF1 / DIMINUTO (DIM)
Curator Summary: Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.
Computational Description: DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094).
Link: InterPro Scan - TAIR

AT3G19830.1

Model type: Protein coding
Short Description: Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description: NTMC2T5.2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2404, transmembrane (InterPro:IPR019411), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: N-terminal-transmembrane-C2 domain type 5.1 (TAIR:AT1G50260.1); Has 1308 Blast hits to 1143 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 350; Fungi - 235; Plants - 647; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Link: InterPro Scan - TAIR