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11-3758-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1276922 [Map]; Strand: c
      • AT1G04600.1 - [+] show detail - myosin XI A
        Distance: 4546; Region: intergenic
      • AT1G04610.1 - [+] show detail - YUCCA 3
        Distance: -2466; Region: intergenic
    Flanking Genome Sequence: 11-3758-1 - 3-prime edge
    GATATGATCA TACATATATG GGCTACATAG CACGTATGAT GTATGCACGT 
    AAATCAAAAC AGTACATCGA ACATTTTAGT TAAATTTAAA CCAACATACC
    GTAAGAATGC TAAAATATGT GTAATCGGTG CATTAATGTT AGCNTTTCGA
    GGTTTCTAGG AAATGTGACC ACACCACTAA CCAAGTCTTG GAATATGGTG
    AATGTGAGCA ATTCCCCAAG TCTTTTTAGT CTTCACTTCT CACTTTATGA
    TCTCTCAATC AACGAGAATG GAACACGCCT TCAATTTCGA TTCTCTATAT
    ATATGCATCA AATTAACCAA AAAATAGTGT TTATTCCAAG AAATGTTCAG
    CAACCACGTA CCCGTTATCC ACATGTAGAG CTTATTTCAC TTTGATAGTT
    TATAGTTATA ATGATATGTG ACTTTTTGTG TTAAATAATA AATTGTGCCT
    TTTTCAATAT GCTGACTAGC AAAAGTGTTG AGTTACGATA TACTTTTTGG
    TAAACGAGTT ATGACTACAG AAATGGTCGG TGAAACTAAA AGGTAAGAAC
    TTCCGAATAT TCTCGAGAAT TTCTATTCAA TTGTTCGTCG ATTATCCGAT
    TATATATGGA AATTAACACT AACTTCTCTG CCAAAGCAAG CGCATGTTGG
    TTTTCCTCTA NATTGGTGCA TATTATTCTA CATTTTCCTC CGATCATATT
    TAAGTGAAAA AATTATTGGT ATAGTTTANA ATAAAGTTAC CGC

AT1G04600.1

Model type
Protein coding
Short Description
myosin XI A
Curator Summary
member of Myosin-like proteins
Computational Description
myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04610.1

Model type
Protein coding
Short Description
YUCCA 3
Computational Description
YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).
Link
InterPro Scan - TAIR