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11-3551-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3448851 [Map]; Strand: w
      • AT1G10480.1 - [+] show detail - zinc finger protein 5
        Distance: -840; Region: promoter
    Flanking Genome Sequence: 11-3551-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA AGCTCGCTTA AATTTATGAT GGATATATGC 
    GTTATTCAAA TACATAGTGA AATTTAATAT CATTATGGGA TCAAAATATT 
    ATACTTAACC TTCCATGTTG ATTATATTTT TTGGCCTAAG TTGGTTAGCC 
    TTATTTCTTC ATATCTTTCT TTGACTTTTG ATATTAGATC AATAATATGA 
    TATTAACATC TTAATGTTCT CTTTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3419765 [Map]; Strand: w
      • AT1G10410.1 - [+] show detail - Protein of unknown function (DUF1336)
        Distance: -126; Region: promoter
    Flanking Genome Sequence: 11-3551-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    ACCGACGTAC TTAATCAGAT CCGGTTTAAG AACTCGGTTT AATTCAATGG 
    TTCAAATTAA AAGAGAGAAA AACAAAACAA CCAAAAGAAC GAAGAGATAA 
    AATAACTCTT TAACTACTTC TTCTTCCTCT TCTTCTTCGT TGATATTTTT 
    TCTCTCATTT TATTGACTTT CCGAATCTCC AAAAATCTAA CCCAAAAAAT 
    AAACAATAGT TTTTTTTTTN TCCGCAANGG AAAAATCTTT TNTTCCCCAA 
    ATAATTGGTC TNTTTCGCAA ATCTNAGCTN TNTNTCNAAG GGCCTTTCAN 
    CNANAAATTG GGGGGCTTNA TTCATTNATA GGGTGGTTTN GANGANGACA 
    NATTCTNTTN CCANAANTNG ATCAAANANA AAANCGTGGC NCTCTCTGGA 
    TTCCTTTNCG GTTTTTTTTT TAAAAAAAAA TTGGNCCNGG GNANGNACCN 
    CCNCNTNNGG GNGGGGGGGG CCTATTTTTT ANTTTTTAAA AAAAAAAAGG 
    GGGGGNNGGN NNTCNCCCCC AAAAANCNGG NNGGGNCCAA ANNGGGGGCC 
    NNTTAACCNG GGGNANAGNC NNAAANANCA AAAANTNCAA NGNAAAANGG 
    CCNNNGTTTT TTTTNGTTTT TTTGGGGGNT TTTTNAAAAA TTTTNGNNNN 
    TNNTNNNNGA ANTTTTTTNA NCCAGNTTTG GGGGGGNNNN TTTTTTTCCC 
    CCCNNGGGNC CCNNGGNNNN ANGGAAAATN

AT1G10410.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1336)
Computational Description
Protein of unknown function (DUF1336); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G59650.1); Has 292 Blast hits to 292 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 5; Plants - 234; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10480.1

Model type
Protein coding
Short Description
zinc finger protein 5
Curator Summary
Encodes a zinc finger protein containing only a single zinc finger.
Computational Description
zinc finger protein 5 (ZFP5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 905 Blast hits to 903 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 900; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR