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Mutant Lines
11-3213-1

11-3213-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1073086 [Map]; Strand: c
  - AT1G04130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -341; Region: promoter
Flanking Genome Sequence: 11-3213-1 - 5-prime edge
```
GTGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTA AGACATCACA AGTGATAGAA CTTTTCTTAG 
TACCATAGTT GAATTTAAGG TGGTGGGCCA TTCAATGGGC CTAACTTGGC 
CCGTACAATC TGTAACATCA TTTAGTATTG AATT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1073079 [Map]; Strand: c
- AT1G04130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -348; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTGTCGTTTT ATTTCTCACC GACCTTTTTC TTACATTGTC CCCCGCTCTC 
ACCTTTCCTT TAGACTCCGG TGTCTCAGTC TCACTGTCAC TGGAATTTAT 
TATTCGACTC AGAAATTTCA CTTTAAAAAA AAAAATCTCG GGNGNGTNAA 
ATTNGGGCCC ATAATACTCT NTCATNTNCN CNCAATCGNG GCTNATGANA 
NCTNTNGANA TCAAACCGGG ACAATAGTNT NAAACCGGTN TTCGGTTAAC 
NANAGGAAAN AACCGGTNTN NGNCCCTNTC CCTCCAAANA ACTCNAAGCT

AT1G04130.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G56440.1); Has 5277 Blast hits to 4657 proteins in 398 species: Archae - 14; Bacteria - 308; Metazoa - 2191; Fungi - 837; Plants - 950; Viruses - 0; Other Eukaryotes - 977 (source: NCBI BLink).
Link: InterPro Scan - TAIR