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11-2288-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1539627 [Map]; Strand: w
      • AT1G05290.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-2288-1 - 3-prime edge 
    GCATCTGGTA TGTCATCGGA TATACATAAA GATTACAACA CTGAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1539743 [Map]; Strand: w
      • AT1G05290.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 11-2288-1 - 5-prime edge 
    CCAGATGCTG AAGTTGGTAA AGTCTATTAC ACAATGAAAC AAAAATATAT 
    AAATAAGTCA ACCATAATTA AAGATAATTA ATATGCAGAC AGAATTAAAG 
    CTGATGTTTA CATTGGTCAG GCAGTGGTCT CTGAATTGTC TCTTGCTAAT 
    TCATCGATTA GCTCCGTGAG GATCAAATCT TCCTCGGGGT TATNTTGTTT 
    TAGGTCTANG NNTGCTGCCT CGGCGCCATC AAAAGTGTTN ATCAANACAT 
    TCTCTATGTG TTCTTTAGTT TCGTATCTTA TGAAGCCTGA GCATGAACTA 
    TCCTGCGTAA AAGCGACGCA CTATGAAACA GTGGAACGAN TCACGCGAAC 
    ACTATNTNTC TCATAACANC NGAACAAATA CCCTCTNTTT ANCAGNGNAC 
    AAAAANNNCN GGGGTGCACC TTAANGAATT ATGNGCANAT ANCCCCNGCT 
    GNGNNGTCCN CACAAANAAN NNGGCGGAGG CGCCNGCGCG GGGCGCNCAC 
    ANTNNTTGGG TGGNGGGACC NTAAGNNGNG GGNGGNTTTT TAAAATTNTA 
    NNCCCCCNAA ANAGGGGGAT GGGCCCCNCN NAAAAAAAAT NTTNGGNNNG 
    GGTNAAAANA AAAAANANGA NCCCGGGGGG AANTTTGANC CCNGNTNNTG 
    GNNNTTTGGN TTCNNNNCNN CCNANCCCCN NTTTNTNNAA AAANATNNNA 
    NNNNNTTTTT TGGGGGGGNG GGGGGCNNNN NGNACCCCNN NCCCCCCC

AT1G05290.1

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT3G21880.1); Has 1471 Blast hits to 1456 proteins in 101 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1426; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR