InterPro Scan Result: RAFL09-12-H17

SEQUENCE: RAFL09-12-H17_1_ORF2 CRC64: 7ECA5D81FBB5E219 LENGTH: 93 aa
noIPR
unintegrated
unintegrated
seg[3-14]? NA seg seg[18-35]? NA seg seg[52-74]? NA seg segseg
SEQUENCE: RAFL09-12-H17_1_ORF3 CRC64: 5683F1CD11C5371D LENGTH: 75 aa
No hits reported.
SEQUENCE: RAFL09-12-H17_2_ORF2 CRC64: A89FED1A604A42F4 LENGTH: 572 aa
InterPro
IPR002344
Family
Lupus La protein
PR00302[227-244]T 4.1e-08 PR00302 LUPUSLA[253-268]T 4.1e-08 PR00302 LUPUSLA[284-297]T 4.1e-08 PR00302 LUPUSLA[306-322]T 4.1e-08 PR00302 LUPUSLALUPUSLA
InterPro
IPR006630
Domain
RNA-binding protein Lupus La
PF05383[224-283]T 4e-21 PF05383 LaLa
SM00715[218-298]T 4.5e-39 SM00715 no descriptionno description
PS50961[214-305]T 23.925 PS50961 HTH_LAHTH_LA
InterPro
IPR011991
Domain
Winged helix-turn-helix transcription repressor DNA-binding
G3DSA:1.10.10.10[211-302]T 3.9e-24 G3DSA:1.10.10.10 no descriptionno description
noIPR
unintegrated
unintegrated
PTHR22792[209-563]T 1.2e-111 PTHR22792 LUPUS LA PROTEIN-RELATEDLUPUS LA PROTEIN-RELATED
PTHR22792:SF3[209-563]T 1.2e-111 PTHR22792:SF3 RNA-BINDING PROTEINRNA-BINDING PROTEIN
seg[16-27]? NA seg seg[44-76]? NA seg seg[85-110]? NA seg seg[136-157]? NA seg seg[350-361]? NA seg seg[425-436]? NA seg seg[475-524]? NA seg seg[537-553]? NA seg segseg
SSF46785[211-302]T 3.2e-27 SSF46785 "Winged helix" DNA-binding domain
SSF54928[304-425]T 1.3e-08 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL09-12-H17_3_ORF1 CRC64: BD502A7657C0458B LENGTH: 68 aa
No hits reported.
SEQUENCE: RAFL09-12-H17_3_ORF2 CRC64: A5B7191EE3EE1FB0 LENGTH: 62 aa
noIPR
unintegrated
unintegrated
seg[39-57]? NA seg segseg
SEQUENCE: RAFL09-12-H17_3_ORF3 CRC64: 1EB51FB6A490ABA9 LENGTH: 50 aa
noIPR
unintegrated
unintegrated
seg[15-32]? NA seg segseg
SEQUENCE: RAFL09-12-H17_3_ORF4 CRC64: 78AF681711159307 LENGTH: 69 aa
noIPR
unintegrated
unintegrated
seg[30-59]? NA seg segseg
SEQUENCE: RAFL09-12-H17_4_ORF2 CRC64: AC58725205D6EEEC LENGTH: 62 aa
noIPR
unintegrated
unintegrated
seg[47-61]? NA seg segseg
SEQUENCE: RAFL09-12-H17_5_ORF2 CRC64: 3887A536FABA959F LENGTH: 51 aa
noIPR
unintegrated
unintegrated
seg[9-20]? NA seg segseg
SEQUENCE: RAFL09-12-H17_5_ORF3 CRC64: FEDB4B0CEB444BB6 LENGTH: 152 aa
noIPR
unintegrated
unintegrated
seg[36-86]? NA seg seg[89-100]? NA seg segseg
SEQUENCE: RAFL09-12-H17_5_ORF4 CRC64: 3F46D8DE5D45729A LENGTH: 67 aa
No hits reported.
SEQUENCE: RAFL09-12-H17_5_ORF5 CRC64: 34BEE0A1E5FCA33A LENGTH: 109 aa
noIPR
unintegrated
unintegrated
seg[6-17]? NA seg seg[25-46]? NA seg seg[78-98]? NA seg segseg
SEQUENCE: RAFL09-12-H17_5_ORF6 CRC64: 79A67EF7B9B927A7 LENGTH: 52 aa
No hits reported.
SEQUENCE: RAFL09-12-H17_6_ORF1 CRC64: 73A436F853BAFD14 LENGTH: 61 aa
noIPR
unintegrated
unintegrated
seg[26-40]? NA seg segseg
SEQUENCE: RAFL09-12-H17_6_ORF2 CRC64: 185D4EBB5F52EDBE LENGTH: 130 aa
noIPR
unintegrated
unintegrated
seg[44-51]? NA seg seg[56-73]? NA seg seg[102-108]? NA seg segseg
SEQUENCE: RAFL09-12-H17_6_ORF3 CRC64: 1B1C6EE3AA9F1F27 LENGTH: 77 aa
noIPR
unintegrated
unintegrated
seg[2-13]? NA seg seg[20-28]? NA seg seg[40-59]? NA seg segseg
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