InterPro Scan Result: AT5G63920.1

SEQUENCE: AT5G63920.1 CRC64: 806A59EAD08CBB08 LENGTH: 926 aa
InterPro
IPR000380
Family
DNA topoisomerase, type IA
PR00417[118-131]T 1.5999988934925166E-15 PR00417 PRTPISMRASEI[218-236]T 1.5999988934925166E-15 PR00417 PRTPISMRASEI[337-346]T 1.5999988934925166E-15 PR00417 PRTPISMRASEI[419-435]T 1.5999988934925166E-15 PR00417 PRTPISMRASEI[517-531]T 1.5999988934925166E-15 PR00417 PRTPISMRASEIPRTPISMRASEI
PTHR11390[1-877]T 0.0 PTHR11390 Topo_IATopo_IA
InterPro
IPR001878
Domain
Zinc finger, CCHC-type
SM00343[766-782]T 0.02900000362699078 SM00343 ZnF_C2HC[901-917]T 0.0065999985252637484 SM00343 ZnF_C2HCZnF_C2HC
PS50158[767-782]T 0.0 PS50158 ZF_CCHC[901-917]T 0.0 PS50158 ZF_CCHCZF_CCHC
InterPro
IPR003601
Domain
DNA topoisomerase, type IA, domain 2
SM00436[147-248]T 5.2999965755018865E-28 SM00436 TOP1BcTOP1Bc
InterPro
IPR003602
Domain
DNA topoisomerase, type IA, DNA-binding
SM00437[295-555]T 2.0000139277205005E-74 SM00437 TOP1AcTOP1Ac
InterPro
IPR006171
Domain
Toprim domain
PF01751[11-152]T 3.2000000000000003E-15 PF01751 ToprimToprim
SM00493[10-144]T 1.2999992446817899E-19 SM00493 TOPRIMTOPRIM
InterPro
IPR010666
Domain
Zinc finger, GRF-type
PF06839[804-844]T 2.8999999999999995E-9 PF06839 zf-GRFzf-GRF
InterPro
IPR013084
Domain
Zinc finger, CCHC retroviral-type
G3DSA:4.10.60.10[760-782]T 1.6000000000000008E-6 G3DSA:4.10.60.10 Znf_CCH_retrovir[897-918]T 1.6000000000000008E-6 G3DSA:4.10.60.10 Znf_CCH_retrovirZnf_CCH_retrovir
InterPro
IPR013497
Domain
DNA topoisomerase, type IA, central
PF01131[171-593]T 9.49999999999983E-101 PF01131 Topoisom_bacTopoisom_bac
InterPro
IPR013498
Domain
DNA topoisomerase, type IA, zn finger
PF01396[639-677]T 2.200000000000004E-6 PF01396 zf-C4_Topoisomzf-C4_Topoisom
InterPro
IPR013824
Domain
DNA topoisomerase, type IA, central region, subdomain 1
G3DSA:1.10.460.10[178-238]T 3.999999999999978E-42 G3DSA:1.10.460.10 Topo_IA_cen_sub1[500-606]T 3.999999999999978E-42 G3DSA:1.10.460.10 Topo_IA_cen_sub1[640-647]T 3.999999999999978E-42 G3DSA:1.10.460.10 Topo_IA_cen_sub1Topo_IA_cen_sub1
InterPro
IPR013826
Domain
DNA topoisomerase, type IA, central region, subdomain 3
G3DSA:1.10.290.10[303-432]T 1.4E-32 G3DSA:1.10.290.10 Topo_IA_cen_sub3Topo_IA_cen_sub3
InterPro
IPR023405
Domain
DNA topoisomerase, type IA, core domain
SSF56712[9-653]T 0.0 SSF56712 Topo_IA_coreTopo_IA_core
InterPro
IPR023406
Active_site
DNA topoisomerase, type IA, active site
PS00396[332-346]T 0.0 PS00396 TOPOISOMERASE_I_PROKTOPOISOMERASE_I_PROK
noIPR
unintegrated
unintegrated
G3DSA:3.40.50.140[11-173]T 3.0999999999999808E-55 G3DSA:3.40.50.140 G3DSA:3.40.50.140G3DSA:3.40.50.140
PTHR11390:SF17[1-877]T 0.0 PTHR11390:SF17 PTHR11390:SF17PTHR11390:SF17
SEQUENCE: AT5G63920.1 CRC64: 806A59EAD08CBB08 LENGTH: 926 aa
InterPro
IPR000380
Family
DNA topoisomerase, type IA
PRINTSPR00417PRTPISMRASEI
 1.5999988934925166E-15 [118-131]T  1.5999988934925166E-15 [218-236]T  1.5999988934925166E-15 [337-346]T  1.5999988934925166E-15 [419-435]T 
 1.5999988934925166E-15 [517-531]T    
PANTHERPTHR11390Topo_IA
 0.0 [1-877]T    
Parentno parent
ChildrenIPR005733IPR005738IPR005739
Found inno entries
ContainsIPR003601IPR003602IPR006171IPR013497IPR013824IPR013825IPR013826
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase type I activity (GO:0003917)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR001878
Domain
Zinc finger, CCHC-type
SMARTSM00343ZnF_C2HC
 0.02900000362699078 [766-782]T  0.0065999985252637484 [901-917]T   
PROFILEPS50158ZF_CCHC
 0.0 [767-782]T  0.0 [901-917]T   
Parentno parent
ChildrenIPR013084
Found inIPR016713IPR017151
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR003601
Domain
DNA topoisomerase, type IA, domain 2
SMARTSM00436TOP1Bc
 5.2999965755018865E-28 [147-248]T    
Parentno parent
Childrenno children
Found inIPR000380IPR005733IPR005736IPR005738IPR005739IPR013497IPR013824
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase activity (GO:0003916)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR003602
Domain
DNA topoisomerase, type IA, DNA-binding
SMARTSM00437TOP1Ac
 2.0000139277205005E-74 [295-555]T    
Parentno parent
Childrenno children
Found inIPR000380IPR005733IPR005736IPR005738IPR005739IPR013497IPR013824
ContainsIPR013825IPR013826
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase activity (GO:0003916)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR006171
Domain
Toprim domain
PFAMPF01751Toprim
 3.2000000000000003E-15 [11-152]T    
SMARTSM00493TOPRIM
 1.2999992446817899E-19 [10-144]T    
Parentno parent
Childrenno children
Found inIPR000093IPR000380IPR000565IPR005740IPR011557IPR013759IPR013760IPR020607
ContainsIPR018522
GO termsnone
InterPro
IPR010666
Domain
Zinc finger, GRF-type
PFAMPF06839zf-GRF
 2.8999999999999995E-9 [804-844]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsMolecular Function: zinc ion binding (GO:0008270)
InterPro
IPR013084
Domain
Zinc finger, CCHC retroviral-type
GENE3DG3DSA:4.10.60.10Znf_CCH_retrovir
 1.6000000000000008E-6 [760-782]T  1.6000000000000008E-6 [897-918]T   
ParentIPR001878
Childrenno children
Found inno entries
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR013497
Domain
DNA topoisomerase, type IA, central
PFAMPF01131Topoisom_bac
 9.49999999999983E-101 [171-593]T    
Parentno parent
Childrenno children
Found inIPR000380IPR005733IPR005736IPR005738IPR005739
ContainsIPR003601IPR003602IPR013824IPR013825IPR013826
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase activity (GO:0003916)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR013498
Domain
DNA topoisomerase, type IA, zn finger
PFAMPF01396zf-C4_Topoisom
 2.200000000000004E-6 [639-677]T    
Parentno parent
Childrenno children
Found inIPR005733IPR005739IPR014538
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase activity (GO:0003916)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR013824
Domain
DNA topoisomerase, type IA, central region, subdomain 1
GENE3DG3DSA:1.10.460.10Topo_IA_cen_sub1
 3.999999999999978E-42 [640-647]T  3.999999999999978E-42 [500-606]T  3.999999999999978E-42 [178-238]T  
Parentno parent
Childrenno children
Found inIPR000380IPR005733IPR005736IPR005738IPR005739IPR013497
ContainsIPR003601IPR003602
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase activity (GO:0003916)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
Biological Process: DNA unwinding involved in replication (GO:0006268)
InterPro
IPR013826
Domain
DNA topoisomerase, type IA, central region, subdomain 3
GENE3DG3DSA:1.10.290.10Topo_IA_cen_sub3
 1.4E-32 [303-432]T    
Parentno parent
Childrenno children
Found inIPR000380IPR003602IPR013497
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase activity (GO:0003916)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
Biological Process: DNA unwinding involved in replication (GO:0006268)
InterPro
IPR023405
Domain
DNA topoisomerase, type IA, core domain
SUPERFAMILYSSF56712Topo_IA_core
 0.0 [9-653]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone
InterPro
IPR023406
Active_site
DNA topoisomerase, type IA, active site
PROSITEPS00396TOPOISOMERASE_I_PROK
 0.0 [332-346]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone
noIPR
unintegrated
unintegrated
GENE3DG3DSA:3.40.50.140G3DSA:3.40.50.140
 3.0999999999999808E-55 [11-173]T    
PANTHERPTHR11390:SF17PTHR11390:SF17
 0.0 [1-877]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone