InterPro Scan Result: AT5G04130.1

SEQUENCE: AT5G04130.1 CRC64: 059EF1601E779189 LENGTH: 732 aa
InterPro
IPR000565
Family
DNA topoisomerase, type IIA, subunit B
PR01159[91-101]T 1.2e-49 PR01159 DNAGYRASEB[272-287]T 1.2e-49 PR01159 DNAGYRASEB[287-300]T 1.2e-49 PR01159 DNAGYRASEB[315-337]T 1.2e-49 PR01159 DNAGYRASEB[407-423]T 1.2e-49 PR01159 DNAGYRASEB[455-469]T 1.2e-49 PR01159 DNAGYRASEB[469-489]T 1.2e-49 PR01159 DNAGYRASEB[565-574]T 1.2e-49 PR01159 DNAGYRASEB[683-695]T 1.2e-49 PR01159 DNAGYRASEB[699-715]T 1.2e-49 PR01159 DNAGYRASEBDNAGYRASEB
InterPro
IPR001241
Domain
DNA topoisomerase, type IIA, subunit B/N-terminal
PR00418[120-135]T 3.6e-66 PR00418 TPI2FAMILY[155-168]T 3.6e-66 PR00418 TPI2FAMILY[200-214]T 3.6e-66 PR00418 TPI2FAMILY[363-376]T 3.6e-66 PR00418 TPI2FAMILY[515-529]T 3.6e-66 PR00418 TPI2FAMILY[582-598]T 3.6e-66 PR00418 TPI2FAMILY[600-617]T 3.6e-66 PR00418 TPI2FAMILY[620-632]T 3.6e-66 PR00418 TPI2FAMILY[662-678]T 3.6e-66 PR00418 TPI2FAMILYTPI2FAMILY
SM00433[120-723]T 5.3e-282 SM00433 no descriptionno description
InterPro
IPR002288
Domain
DNA topoisomerase, type IIA, subunit B, C-terminal
PF00986[657-719]T 1.9e-26 PF00986 DNA_gyraseB_CDNA_gyraseB_C
InterPro
IPR003594
Domain
ATPase-like, ATP-binding domain
G3DSA:3.30.565.10[90-307]T 1.4e-90 G3DSA:3.30.565.10 no descriptionno description
PF02518[118-264]T 9.7e-18 PF02518 HATPase_cHATPase_c
SM00387[116-266]T 6.1e-25 SM00387 no descriptionno description
SSF55874[90-310]T 4.1e-65 SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinaseATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
InterPro
IPR006171
Domain
Toprim domain
PF01751[514-614]T 6.8e-05 PF01751 ToprimToprim
InterPro
IPR013506
Domain
DNA topoisomerase, type IIA, subunit B, domain 2
PF00204[316-485]T 9.3e-54 PF00204 DNA_gyraseBDNA_gyraseB
InterPro
IPR013759
Domain
DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta
G3DSA:3.40.50.670[496-704]T 1.5e-90 G3DSA:3.40.50.670 no descriptionno description
InterPro
IPR013760
Domain
DNA topoisomerase, type IIA, central
SSF56719[489-730]T 1.6e-89 SSF56719 Type II DNA topoisomeraseType II DNA topoisomerase
InterPro
IPR014721
Domain
Ribosomal protein S5 domain 2-type fold, subgroup
G3DSA:3.30.230.10[315-486]T 2.1e-57 G3DSA:3.30.230.10 no descriptionno description
InterPro
IPR018522
Conserved_site
DNA topoisomerase, type IIA, conserved site
PS00177[517-525]T NA PS00177 TOPOISOMERASE_IITOPOISOMERASE_II
InterPro
IPR020568
Domain
Ribosomal protein S5 domain 2-type fold
SSF54211[316-487]T 1.8e-51 SSF54211 Ribosomal protein S5 domain 2-likeRibosomal protein S5 domain 2-like
noIPR
unintegrated
unintegrated
PTHR10169[66-727]T 0 PTHR10169 DNA TOPOISOMERASE/GYRASEDNA TOPOISOMERASE/GYRASE
seg[3-17]? NA seg seg[20-31]? NA seg seg[37-51]? NA seg seg[190-210]? NA seg seg[469-498]? NA seg segseg
SEQUENCE: AT5G04130.1 CRC64: 059EF1601E779189 LENGTH: 732 aa
InterPro
IPR000565
Family
DNA topoisomerase, type IIA, subunit B
PRINTSPR01159DNAGYRASEB
 1.2e-49 [91-101]T  1.2e-49 [272-287]T  1.2e-49 [287-300]T  1.2e-49 [315-337]T 
 1.2e-49 [407-423]T  1.2e-49 [455-469]T  1.2e-49 [469-489]T  1.2e-49 [565-574]T 
 1.2e-49 [683-695]T  1.2e-49 [699-715]T   
Parentno parent
ChildrenIPR005740IPR011557
Found inno entries
ContainsIPR001241IPR002288IPR006171IPR013506IPR013759IPR013760IPR018522IPR020568
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
Molecular Function: ATP binding (GO:0005524)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR001241
Domain
DNA topoisomerase, type IIA, subunit B/N-terminal
PRINTSPR00418TPI2FAMILY
 3.6e-66 [120-135]T  3.6e-66 [155-168]T  3.6e-66 [200-214]T  3.6e-66 [363-376]T 
 3.6e-66 [515-529]T  3.6e-66 [582-598]T  3.6e-66 [600-617]T  3.6e-66 [620-632]T 
 3.6e-66 [662-678]T    
SMARTSM00433no description
 5.3e-282 [120-723]T    
Parentno parent
Childrenno children
Found inIPR000565IPR001154IPR005737IPR005740IPR011557
ContainsIPR002288IPR003594IPR013506IPR013759IPR013760IPR018522IPR020568
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
Molecular Function: ATP binding (GO:0005524)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR002288
Domain
DNA topoisomerase, type IIA, subunit B, C-terminal
PFAMPF00986DNA_gyraseB_C
 1.9e-26 [657-719]T    
Parentno parent
Childrenno children
Found inIPR000565IPR001241IPR005737IPR005740IPR011557IPR013759IPR013760
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
Molecular Function: ATP binding (GO:0005524)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR003594
Domain
ATPase-like, ATP-binding domain
GENE3DG3DSA:3.30.565.10no description
 1.4e-90 [90-307]T    
PFAMPF02518HATPase_c
 9.7e-18 [118-264]T    
SMARTSM00387no description
 6.1e-25 [116-266]T    
SUPERFAMILYSSF55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
 4.1e-65 [90-310]T    
Parentno parent
ChildrenIPR004358IPR020575
Found inIPR001241IPR001294IPR001404IPR002099IPR005467IPR005734IPR005737IPR005740IPR006290IPR008358IPR010193IPR010194IPR011186IPR011557IPR012129IPR014285IPR014525IPR014763IPR015434IPR015566IPR016380IPR016381IPR016781IPR017171IPR017202IPR017204IPR017205IPR017206IPR020667IPR022510
ContainsIPR014762IPR019805
GO termsMolecular Function: ATP binding (GO:0005524)
InterPro
IPR006171
Domain
Toprim domain
PFAMPF01751Toprim
 6.8e-05 [514-614]T    
Parentno parent
Childrenno children
Found inIPR000093IPR000380IPR000565IPR005740IPR011557IPR013759IPR013760IPR020607
ContainsIPR018522
GO termsnone
InterPro
IPR013506
Domain
DNA topoisomerase, type IIA, subunit B, domain 2
PFAMPF00204DNA_gyraseB
 9.3e-54 [316-485]T    
ParentIPR014721
Childrenno children
Found inIPR000565IPR001241IPR005737IPR005740IPR011557
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
Molecular Function: ATP binding (GO:0005524)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR013759
Domain
DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta
GENE3DG3DSA:3.40.50.670no description
 1.5e-90 [496-704]T    
Parentno parent
Childrenno children
Found inIPR000565IPR001154IPR001241IPR005737IPR005740IPR011557IPR013760
ContainsIPR002288IPR006171IPR018522
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
Molecular Function: ATP binding (GO:0005524)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR013760
Domain
DNA topoisomerase, type IIA, central
SUPERFAMILYSSF56719Type II DNA topoisomerase
 1.6e-89 [489-730]T    
Parentno parent
Childrenno children
Found inIPR000565IPR001154IPR001241IPR005737IPR005740IPR005741IPR005742IPR005743IPR011557
ContainsIPR002205IPR002288IPR006171IPR013757IPR013758IPR013759IPR018522
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
Molecular Function: ATP binding (GO:0005524)
Cellular Component: chromosome (GO:0005694)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR014721
Domain
Ribosomal protein S5 domain 2-type fold, subgroup
GENE3DG3DSA:3.30.230.10no description
 2.1e-57 [315-486]T    
ParentIPR020568
ChildrenIPR005324IPR005517IPR013506IPR013507IPR015192IPR015320
Found inIPR000705IPR000870IPR001174IPR002099IPR004424IPR004540IPR004543IPR005734IPR005916IPR005917IPR005935IPR006205IPR006206IPR010189IPR012369IPR014606IPR014763IPR015434IPR016005IPR020667
ContainsIPR006203IPR006204IPR019539IPR019741IPR020539IPR020574
GO termsnone
InterPro
IPR018522
Conserved_site
DNA topoisomerase, type IIA, conserved site
PROSITEPS00177TOPOISOMERASE_II
 NA [517-525]T    
Parentno parent
Childrenno children
Found inIPR000565IPR001154IPR001241IPR005737IPR005740IPR006171IPR011557IPR013759IPR013760
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
Molecular Function: ATP binding (GO:0005524)
Biological Process: DNA topological change (GO:0006265)
InterPro
IPR020568
Domain
Ribosomal protein S5 domain 2-type fold
SUPERFAMILYSSF54211Ribosomal protein S5 domain 2-like
 1.8e-51 [316-487]T    
Parentno parent
ChildrenIPR001247IPR001498IPR008269IPR011334IPR014721IPR015870
Found inIPR000565IPR000705IPR000807IPR000851IPR001174IPR001241IPR001404IPR001984IPR002099IPR002127IPR002381IPR004422IPR004424IPR004463IPR004482IPR004504IPR004540IPR004543IPR004663IPR004815IPR005711IPR005712IPR005734IPR005737IPR005740IPR005916IPR005917IPR005935IPR006205IPR006206IPR010189IPR011186IPR011557IPR011807IPR012043IPR012162IPR012363IPR012369IPR013473IPR014069IPR014251IPR014252IPR014606IPR014763IPR015434IPR015566IPR015796IPR016005IPR020667IPR020869
ContainsIPR006203IPR006204IPR008268IPR018336IPR019539IPR019741IPR020539IPR020565IPR020569IPR020574
GO termsnone
noIPR
unintegrated
unintegrated
PANTHERPTHR10169DNA TOPOISOMERASE/GYRASE
 0 [66-727]T  
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