InterPro Scan Result: AT4G02070.1

SEQUENCE: AT4G02070.1 CRC64: 787A340272CF979C LENGTH: 1324 aa
InterPro
IPR000432
Domain
DNA mismatch repair protein MutS, C-terminal domain
PF00488[1029-1271]T 1.4e-76 PF00488 MutS_VMutS_V
SM00534[1076-1268]T 6.1e-111 SM00534 no descriptionno description
PS00486[1157-1173]T NA PS00486 DNA_MISMATCH_REPAIR_2DNA_MISMATCH_REPAIR_2
InterPro
IPR002999
Domain
Tudor domain
SM00333[121-179]T 7.1e-07 SM00333 no descriptionno description
InterPro
IPR007695
Domain
DNA mismatch repair protein MutS-like, N-terminal
PF01624[380-495]T 8.4e-36 PF01624 MutS_IMutS_I
InterPro
IPR007696
Domain
DNA mismatch repair protein MutS, core
PF05192[694-1020]T 1.2e-31 PF05192 MutS_IIIMutS_III
SM00533[716-1056]T 5.1e-80 SM00533 no descriptionno description
SSF48334[699-1024]T 3.7e-68 SSF48334 DNA repair protein MutS, domain IIIDNA repair protein MutS, domain III
InterPro
IPR007860
Domain
DNA mismatch repair protein MutS, connector
PF05188[506-667]T 1.5e-06 PF05188 MutS_IIMutS_II
SSF53150[493-712]T 3.7e-08 SSF53150 DNA repair protein MutS, domain IIDNA repair protein MutS, domain II
InterPro
IPR007861
Domain
DNA mismatch repair protein MutS, clamp
PF05190[886-977]T 5.1e-21 PF05190 MutS_IVMutS_IV
InterPro
IPR015536
Family
DNA mismatch repair protein MutS-homologue MSH6
PTHR11361:SF31[237-1280]T 0 PTHR11361:SF31 MUTS HOMOLOG 6, MSH6MUTS HOMOLOG 6, MSH6
InterPro
IPR016151
Domain
DNA mismatch repair protein MutS, N-terminal
G3DSA:3.40.1170.10[368-497]T 2.6e-41 G3DSA:3.40.1170.10 no descriptionno description
SSF55271[367-491]T 2.5e-37 SSF55271 DNA repair protein MutS, domain IDNA repair protein MutS, domain I
InterPro
IPR017261
Family
DNA mismatch repair protein Msh6
PIRSF037677[1-1324]T 0 PIRSF037677 DNA mismatch repair protein Msh6DNA mismatch repair protein Msh6
noIPR
unintegrated
unintegrated
coil[964-989]? NA coil coiled-coilcoiled-coil
G3DSA:1.10.1420.10[695-869]T 2.8e-32 G3DSA:1.10.1420.10 no descriptionno description
G3DSA:3.40.50.300[1028-1271]T 1.6e-61 G3DSA:3.40.50.300 no descriptionno description
PTHR11361[237-1280]T 0 PTHR11361 FAMILY NOT NAMEDFAMILY NOT NAMED
seg[27-87]? NA seg seg[212-225]? NA seg seg[233-262]? NA seg seg[1220-1230]? NA seg seg[1294-1308]? NA seg segseg
SSF52540[1027-1274]T 1.1e-51 SSF52540 P-loop containing nucleoside triphosphate hydrolasesP-loop containing nucleoside triphosphate hydrolases
SSF63748[122-163]T 3.7e-08 SSF63748 Tudor/PWWP/MBTTudor/PWWP/MBT
SEQUENCE: AT4G02070.1 CRC64: 787A340272CF979C LENGTH: 1324 aa
InterPro
IPR000432
Domain
DNA mismatch repair protein MutS, C-terminal domain
PFAMPF00488MutS_V
 1.4e-76 [1029-1271]T    
SMARTSM00534no description
 6.1e-111 [1076-1268]T    
PROSITEPS00486DNA_MISMATCH_REPAIR_2
 NA [1157-1173]T    
Parentno parent
Childrenno children
Found inIPR005747IPR005748IPR011184IPR012401IPR017261
Containsno entries
GO termsMolecular Function: ATP binding (GO:0005524)
Biological Process: mismatch repair (GO:0006298)
Molecular Function: mismatched DNA binding (GO:0030983)
InterPro
IPR002999
Domain
Tudor domain
SMARTSM00333no description
 7.1e-07 [121-179]T    
Parentno parent
ChildrenIPR018351
Found inIPR008191IPR016685
ContainsIPR019023
GO termsMolecular Function: nucleic acid binding (GO:0003676)
InterPro
IPR007695
Domain
DNA mismatch repair protein MutS-like, N-terminal
PFAMPF01624MutS_I
 8.4e-36 [380-495]T    
Parentno parent
ChildrenIPR016151
Found inIPR011184
Containsno entries
GO termsMolecular Function: ATP binding (GO:0005524)
Biological Process: mismatch repair (GO:0006298)
Molecular Function: mismatched DNA binding (GO:0030983)
InterPro
IPR007696
Domain
DNA mismatch repair protein MutS, core
PFAMPF05192MutS_III
 1.2e-31 [694-1020]T    
SMARTSM00533no description
 5.1e-80 [716-1056]T    
SUPERFAMILYSSF48334DNA repair protein MutS, domain III
 3.7e-68 [699-1024]T    
Parentno parent
Childrenno children
Found inIPR005747IPR005748IPR011184IPR017261
ContainsIPR007861
GO termsMolecular Function: ATP binding (GO:0005524)
Biological Process: mismatch repair (GO:0006298)
Molecular Function: mismatched DNA binding (GO:0030983)
InterPro
IPR007860
Domain
DNA mismatch repair protein MutS, connector
PFAMPF05188MutS_II
 1.5e-06 [506-667]T    
SUPERFAMILYSSF53150DNA repair protein MutS, domain II
 3.7e-08 [493-712]T    
Parentno parent
Childrenno children
Found inIPR005748IPR011184IPR017261
Containsno entries
GO termsMolecular Function: ATP binding (GO:0005524)
Biological Process: mismatch repair (GO:0006298)
Molecular Function: mismatched DNA binding (GO:0030983)
InterPro
IPR007861
Domain
DNA mismatch repair protein MutS, clamp
PFAMPF05190MutS_IV
 5.1e-21 [886-977]T    
Parentno parent
Childrenno children
Found inIPR005748IPR007696IPR011184IPR017261
Containsno entries
GO termsMolecular Function: ATP binding (GO:0005524)
Biological Process: mismatch repair (GO:0006298)
Molecular Function: mismatched DNA binding (GO:0030983)
InterPro
IPR015536
Family
DNA mismatch repair protein MutS-homologue MSH6
PANTHERPTHR11361:SF31MUTS HOMOLOG 6, MSH6
 0 [237-1280]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone
InterPro
IPR016151
Domain
DNA mismatch repair protein MutS, N-terminal
GENE3DG3DSA:3.40.1170.10no description
 2.6e-41 [368-497]T    
SUPERFAMILYSSF55271DNA repair protein MutS, domain I
 2.5e-37 [367-491]T    
ParentIPR007695
Childrenno children
Found inIPR005748IPR017261
Containsno entries
GO termsMolecular Function: ATP binding (GO:0005524)
Biological Process: mismatch repair (GO:0006298)
Molecular Function: mismatched DNA binding (GO:0030983)
InterPro
IPR017261
Family
DNA mismatch repair protein Msh6
PIRPIRSF037677DNA mismatch repair protein Msh6
 0 [1-1324]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR000432IPR007696IPR007860IPR007861IPR016151
GO termsnone
noIPR
unintegrated
unintegrated
COILcoilcoiled-coil
 NA [964-989]?    
GENE3DG3DSA:1.10.1420.10no description
 2.8e-32 [695-869]T    
GENE3DG3DSA:3.40.50.300no description
 1.6e-61 [1028-1271]T    
PANTHERPTHR11361FAMILY NOT NAMED
 0 [237-1280]T    
SEGsegseg
 NA [27-87]?  NA [212-225]?  NA [233-262]?  NA [1220-1230]? 
 NA [1294-1308]?    
SUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolases
 1.1e-51 [1027-1274]T    
SUPERFAMILYSSF63748Tudor/PWWP/MBT
 3.7e-08 [122-163]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone