InterPro Scan Result: AT2G34210.1

SEQUENCE: AT2G34210.1 CRC64: A940B90557C3A11C LENGTH: 989 aa
InterPro
IPR005100
Repeat
Transcription elongation factor Spt5, NGN domain
PF03439[170-252]T 2.5e-25 PF03439 Spt5-NGNSpt5-NGN
InterPro
IPR005824
Domain
KOW
PF00467[592-614]T 0.00013 PF00467 KOW[686-717]T 8.6e-05 PF00467 KOWKOW
SM00739[260-287]T 8.2 SM00739 no description[412-439]T 0.00036 SM00739 no description[464-491]T 0.00017 SM00739 no description[588-615]T 0.0037 SM00739 no description[683-710]T 0.011 SM00739 no description[936-963]T 0.1 SM00739 no descriptionno description
InterPro
IPR005825
Conserved_site
Ribosomal protein L24/L26, conserved site
PS01108[416-433]T NA PS01108 RIBOSOMAL_L24RIBOSOMAL_L24
InterPro
IPR006645
Domain
Transcription antitermination protein, NusG, N-terminal
SM00738[168-255]T 1.2e-20 SM00738 no descriptionno description
InterPro
IPR008991
Domain
Translation protein SH3-like
SSF50104[399-443]T 6.2e-05 SSF50104 Translation proteins SH3-like domain[455-516]T 4.5e-18 SSF50104 Translation proteins SH3-like domain[588-620]T 0.0012 SSF50104 Translation proteins SH3-like domain[680-731]T 0.02 SSF50104 Translation proteins SH3-like domainTranslation proteins SH3-like domain
InterPro
IPR017071
Family
Transcription elongation factor Spt5
PIRSF036945[1-989]T 0 PIRSF036945 Transcription elongation factor Spt5Transcription elongation factor Spt5
InterPro
IPR022581
Domain
Spt5 transcription elongation factor, N-terminal
PF11942[62-164]T 2.9e-05 PF11942 Spt5_NSpt5_N
noIPR
unintegrated
unintegrated
PTHR11125[2-989]T 0 PTHR11125 FAMILY NOT NAMEDFAMILY NOT NAMED
seg[4-27]? NA seg seg[29-60]? NA seg seg[66-84]? NA seg seg[147-158]? NA seg seg[588-597]? NA seg seg[668-681]? NA seg seg[842-857]? NA seg seg[973-986]? NA seg segseg
SEQUENCE: AT2G34210.1 CRC64: A940B90557C3A11C LENGTH: 989 aa
InterPro
IPR005100
Repeat
Transcription elongation factor Spt5, NGN domain
PFAMPF03439Spt5-NGN
 2.5e-25 [170-252]T    
Parentno parent
Childrenno children
Found inIPR017071
Containsno entries
GO termsnone
InterPro
IPR005824
Domain
KOW
PFAMPF00467KOW
 0.00013 [592-614]T  8.6e-05 [686-717]T   
SMARTSM00739no description
 8.2 [260-287]T  0.00036 [412-439]T  0.00017 [464-491]T  0.0037 [588-615]T 
 0.011 [683-710]T  0.1 [936-963]T   
Parentno parent
Childrenno children
Found inIPR000876IPR001062IPR001141IPR003256IPR005756IPR008991IPR010216IPR011590IPR014723IPR017071
ContainsIPR005825
GO termsnone
InterPro
IPR005825
Conserved_site
Ribosomal protein L24/L26, conserved site
PROSITEPS01108RIBOSOMAL_L24
 NA [416-433]T    
Parentno parent
Childrenno children
Found inIPR003256IPR005756IPR005824IPR008991IPR014723
Containsno entries
GO termsMolecular Function: structural constituent of ribosome (GO:0003735)
Cellular Component: intracellular (GO:0005622)
Cellular Component: ribosome (GO:0005840)
Biological Process: translation (GO:0006412)
InterPro
IPR006645
Domain
Transcription antitermination protein, NusG, N-terminal
SMARTSM00738no description
 1.2e-20 [168-255]T    
Parentno parent
Childrenno children
Found inIPR001062IPR010215IPR010216IPR011590IPR017071
Containsno entries
GO termsMolecular Function: transcription elongation regulator activity (GO:0003711)
Biological Process: positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)
InterPro
IPR008991
Domain
Translation protein SH3-like
SUPERFAMILYSSF50104Translation proteins SH3-like domain
 4.5e-18 [455-516]T  6.2e-05 [399-443]T  0.0012 [588-620]T  0.02 [680-731]T 
Parentno parent
ChildrenIPR014723IPR022669
Found inIPR001062IPR001147IPR001884IPR002171IPR003256IPR005880IPR010215IPR011590IPR011768IPR011897IPR020599
ContainsIPR005824IPR005825IPR014722IPR014726IPR015869IPR018259IPR019769IPR022671
GO termsnone
InterPro
IPR017071
Family
Transcription elongation factor Spt5
PIRPIRSF036945Transcription elongation factor Spt5
 0 [1-989]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR005100IPR005824IPR006645IPR022581
GO termsMolecular Function: transcription elongation regulator activity (GO:0003711)
Biological Process: regulation of transcription from RNA polymerase II promoter (GO:0006357)
InterPro
IPR022581
Domain
Spt5 transcription elongation factor, N-terminal
PFAMPF11942Spt5_N
 2.9e-05 [62-164]T    
Parentno parent
Childrenno children
Found inIPR017071
Containsno entries
GO termsnone
noIPR
unintegrated
unintegrated
PANTHERPTHR11125FAMILY NOT NAMED
 0 [2-989]T    
SEGsegseg
 NA [4-27]?  NA [29-60]?  NA [66-84]?  NA [147-158]? 
 NA [588-597]?  NA [668-681]?  NA [842-857]?  NA [973-986]? 
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone